PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0681.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 211aa    MW: 24130.7 Da    PI: 10.4194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0681.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.81.7e-10106146451
                  AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                          + V++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kaladp0040s0681.3.p 106 RVVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAY 146
                          77887..47*********4.....5********************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.57E-7107149IPR016177DNA-binding domain
SMARTSM003800.0012107161IPR001471AP2/ERF domain
PfamPF008472.8E-4111147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-6112151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MVSVRKAWRK LMGLSPVQSS FVDPLADISS NEKKFDSPPL LSKPIIAHSI PPGVDQTMKD  60
DFRPSLNHLS ASSLTKEQPA PPISEFKRRK RHKRKQIQDQ ETCLMRVVYF KNMKWQAAIK  120
VDKKQIHLGT VGTQEEAAHL YDRAAYMCGR EPNFELSEVE KQELKQLNWD EFLEITRSTI  180
TSKKHQRRGI VSSRRRSVLS SQHSSSMDGE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18795RRKRHKRKQ
28895RKRHKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016461280.15e-60PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_009758063.16e-60PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A068U6G58e-57A0A068U6G5_COFCA; Uncharacterized protein
STRINGGSMUA_Achr8P00300_0018e-56(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-43ERF family protein